| Goals | Players | Sections | Competition |
|---|---|---|---|
| 2 | Mikel San Jose | Group Stage | UEFA Champions League 14/15 |
| 2 | Julen Guerrero | Group Stage | UEFA Champions League 98/99 |
| 1 | Aritz Aduriz | Group Stage | UEFA Champions League 14/15 |
| 1 | Guillermo Fernandez | Group Stage | UEFA Champions League 14/15 |
| 1 | Markel Susaeta | Group Stage | UEFA Champions League 14/15 |
| 1 | Joseba Etxeberria | Group Stage | UEFA Champions League 98/99 |
| 1 | Ismael Urzaiz | Group Stage | UEFA Champions League 98/99 |
| 1 | Jorge Perez | Group Stage | UEFA Champions League 98/99 |
UEFA Champions League 23/24 Top goal scorers