| # | Players | Clubs | Nationality | GC | More |
|---|---|---|---|---|---|
| 1 | Joe Anyon | Port Vale | England | 72 | |
| 2 | Ben Williams | Crewe Alexandra | England | 65 | |
| 3 | Shane Higgs | Cheltenham Town | England | 64 | |
| 4 | Matthew Glennon | Huddersfield Town | England | 58 | |
| 5 | Mark Bunn | Northampton Town | England | 54 | |
| 6 | Stephen Phillips | Bristol Rovers | England | 53 | |
| 7 | Michel Kuipers | Brighton & Hove Albion | Netherlands | 52 | |
| 8 | Dean Brill | Luton Town | England | 47 | |
| 9 | Keiren Westwood | Carlisle United | Republic of Ireland | 47 | |
| 10 | Dorus de Vries | Swansea City | Netherlands | 46 | |
| 11 | Clayton Ince | Walsall | Trinidad and Tobago | 46 | |
| 12 | Danny Coyne | Tranmere Rovers | Wales | 43 | |
| 13 | Neil Sullivan | Doncaster Rovers | Scotland | 43 | |
| 14 | Stuart Nelson | Leyton Orient | England | 42 | |
| 15 | Peter Brezovan | Swindon Town | Slovakia | 40 | |
| 16 | Simon Royce | Gillingham | England | 39 | |
| 17 | Jan Budtz | Hartlepool United | Denmark | 38 | |
| 18 | Mark Crossley | Oldham Athletic | Wales | 38 | |
| 19 | Steve Mildenhall | Yeovil Town | England | 37 | |
| 20 | Paul Smith | Nottingham Forest | England | 33 |
GC = Goals conceded